Package: HDF5DataFrame 0.99.3

Artür Manukyan

HDF5DataFrame: HDF5-backed DataFrame objects and methods

HDF5DataFrame is an R/Bioconductor package for HDF5-backed DataFrame objects and methods. This allows HDF5-backed data to be easily used as data frames with arbitrary sets of columns.

Authors:Artür Manukyan [aut, cre, fnd]

HDF5DataFrame_0.99.3.tar.gz
HDF5DataFrame_0.99.3.zip(r-4.7)HDF5DataFrame_0.99.3.zip(r-4.6)HDF5DataFrame_0.99.3.zip(r-4.5)
HDF5DataFrame_0.99.3.tgz(r-4.6-any)HDF5DataFrame_0.99.3.tgz(r-4.5-any)
HDF5DataFrame_0.99.3.tar.gz(r-4.7-any)HDF5DataFrame_0.99.3.tar.gz(r-4.6-any)
HDF5DataFrame_0.99.3.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
HDF5DataFrame/json (API)
NEWS

# Install 'HDF5DataFrame' in R:
install.packages('HDF5DataFrame', repos = c('https://bimsbbioinfo.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/bimsbbioinfo/hdf5dataframe/issues

On CRAN:

Conda:

datarepresentationinfrastructuresoftware

4.08 score 1 stars 2 packages 1 scripts 12 exports 21 dependencies

Last updated from:61c52cb4ee. Checks:9 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-x86_64OK221
source / vignettesOK226
linux-release-x86_64OK192
macos-release-arm64OK201
macos-oldrel-arm64OK162
windows-develOK213
windows-releaseOK156
windows-oldrelOK161
wasm-releaseOK114

Exports:DelayedArrayextract_arrayextractCOLSextractROWSHDF5ColumnSeedHDF5ColumnVectorHDF5DataFramepathreplaceCOLSreplaceROWStypewriteHDF5DataFrame

Dependencies:abindBiocGenericsbiocmakeDelayedArraydir.expiryfilelockgenericsh5mreadHDF5ArrayIRangeslatticeMatrixMatrixGenericsmatrixStatsrhdf5rhdf5filtersRhdf5libS4ArraysS4VectorsSparseArrayXVector

HDF5DataFrame

Artur Manukyan

Rendered fromHDF5DataFrame.Rmdusingknitr::rmarkdownon Jun 04 2026.

Last update: 2025-11-22
Started: 2025-05-02

Readme and manuals

Help Manual

Help pageTopics
HDF5ColumnSeedDelayedArray,HDF5ColumnSeed-method dim,HDF5ColumnSeed-method extract_array,HDF5ColumnSeed-method HDF5ColumnSeed HDF5ColumnVector path,HDF5ColumnSeed-method type,HDF5ColumnSeed-method
HDF5ColumnSeed ClassHDF5ColumnSeed-class
HDF5ColumnVector ClassHDF5ColumnVector-class
HDF5-backed DataFrameas.data.frame,HDF5DataFrame-method cbind,HDF5DataFrame-method HDF5DataFrame length,HDF5DataFrame-method names,HDF5DataFrame-method names<-,HDF5DataFrame-method nrow,HDF5DataFrame-method path,HDF5DataFrame-method rownames,HDF5DataFrame-method rownames<-,HDF5DataFrame-method [[,HDF5DataFrame-method [[<-,HDF5DataFrame-method
HDF5DataFrame ClassHDF5DataFrame-class
subsetting-utilsextractCOLS,HDF5DataFrame,ANY-method extractCOLS,HDF5DataFrame-method extractROWS,HDF5DataFrame,ANY-method replaceCOLS,HDF5DataFrame,ANY-method replaceCOLS,HDF5DataFrame-method replaceROWS,HDF5DataFrame,ANY-method replaceROWS,HDF5DataFrame-method subsetting-utils
writeHDF5DataFramewriteHDF5DataFrame