{ "_id": "6a4817f0e06c18f0a652c229", "Package": "ZarrDataFrame", "Version": "0.0.0", "Date": "2024-03-11", "Title": "Bioconductor-friendly Bindings for Zarr", "Description": "Implements bindings for zarr store that are compatible\nwith Bioconductor S4 data structures, namely the DataFrame and\nDelayedArray. This allows Zarr-backed data to be easily used as\ndata frames with arbitrary sets of columns", "Authors@R": "c(\nperson(\"Artur\", \"Manukyan\", role=c(\"aut\", \"cre\"), email=\"artur-man@hotmail.com\")\n)", "License": "MIT + file LICENSE", "biocViews": "DataRepresentation, Infrastructure, Software", "VignetteBuilder": "knitr", "RoxygenNote": "7.3.3", "Encoding": "UTF-8", "Config/testthat/edition": "3", "Config/pak/sysreqs": "libblosc-dev libxml2-dev libzstd-dev libssl-dev\nzlib1g-dev", "Repository": "https://bimsbbioinfo.r-universe.dev", "Date/Publication": "2026-04-27 20:41:35 UTC", "RemoteUrl": "https://github.com/BIMSBbioinfo/ZarrDataFrame", "RemoteRef": "HEAD", "RemoteSha": "f5f671521934b2afc3c511f8c09181bc7bb789a4", "NeedsCompilation": "no", "Packaged": { "Date": "2026-07-03 20:09:05 UTC", "User": "root" }, "Author": "Artur Manukyan [aut, cre]", "Maintainer": "Artur Manukyan ", "_user": "bimsbbioinfo", "_type": "src", "_file": "ZarrDataFrame_0.0.0.tar.gz", "_fileid": "https://r2.ropensci.org/4d83384c6f581b9d8fef3d6637117df9bb831441822efdb4546e0d60c13c25fe", "_filesize": 90770, "_sha256": "4d83384c6f581b9d8fef3d6637117df9bb831441822efdb4546e0d60c13c25fe", "_expires": "2026-10-11T20:13:35.000Z", "_created": "2026-07-03T20:09:05.000Z", "_published": "2026-07-03T20:13:36.681Z", "_jobs": [ { "job": 85065349093, "time": 207, "config": "linux-devel-x86_64", "r": "4.7.0", "check": "NOTE", "artifact": "8074155743" }, { "job": 85065349038, "time": 216, "config": "linux-release-x86_64", "r": "4.6.1", "check": "NOTE", "artifact": "8074157418" }, { "job": 85065349081, "time": 123, "config": "macos-oldrel-arm64", "r": "4.5.3", "check": "NOTE", "artifact": "8074139649" }, { "job": 85065349035, "time": 129, "config": "macos-release-arm64", "r": "4.6.1", "check": "NOTE", "artifact": "8074140839" }, { "job": 85064936061, "time": 235, "config": "source", "r": "4.6.1", "check": "OK", "artifact": "8074115793" }, { "job": 85065349026, "time": 146, "config": "wasm-release", "r": "4.6.0", "check": "OK", "artifact": "8074144045" }, { "job": 85065349053, "time": 157, "config": "windows-devel", "r": "4.7.0", "check": "NOTE", "artifact": "8074146335" }, { "job": 85065349045, "time": 144, "config": "windows-oldrel", "r": "4.5.3", "check": "NOTE", "artifact": "8074143596" }, { "job": 85065349056, "time": 169, "config": "windows-release", "r": "4.6.1", "check": "NOTE", "artifact": "8074148540" } ], "_host": "GitHub-Actions", "_buildurl": "https://github.com/r-universe/bimsbbioinfo/actions/runs/28681213034", "_status": "success", "_upstream": "https://github.com/BIMSBbioinfo/ZarrDataFrame", "_commit": { "id": "f5f671521934b2afc3c511f8c09181bc7bb789a4", "author": "Artür Manukyan ", "committer": "GitHub ", "message": "Add ZarrArray to DESCRIPTION file", "time": 1777322495 }, "_maintainer": { "name": "Artur Manukyan", "email": "artur-man@hotmail.com", "login": "artur-man", "description": "Bioinformatics Scientist at MDC BIMSB\n", "uuid": 39335576 }, "_distro": "resolute", "_registered": true, "_dependencies": [ { "package": "DelayedArray", "role": "Depends" }, { "package": "S4Vectors", "role": "Depends" }, { "package": "stats", "role": "Imports" }, { "package": "utils", "role": "Imports" }, { "package": "methods", "role": "Imports" }, { "package": "BiocGenerics", "role": "Imports" }, { "package": "Rarr", "role": "Imports" }, { "package": "ZarrArray", "role": "Imports" }, { "package": "testthat", "version": ">= 3.0.0", "role": "Suggests" }, { "package": "knitr", "role": "Suggests" } ], "_owner": "bimsbbioinfo", "_selfowned": true, "_usedby": 2, "_updates": [ { "week": "2026-17", "n": 1 }, { "week": "2026-18", "n": 1 } ], "_tags": [], "_topics": [ "datarepresentation", "infrastructure", "software" ], "_stars": 0, "_contributors": [ { "user": "artur-man", "count": 15, "uuid": 39335576 } ], "_userbio": { "uuid": 6482905, "type": "organization", "name": "BIMSB bioinformatics platform / Akalin Lab", "followers": 189, "description": "git repositories for the Akalin lab" }, "_downloads": { "count": 0, "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/ZarrDataFrame" }, "_devurl": "https://github.com/bimsbbioinfo/zarrdataframe", "_searchresults": 1, "_rbuild": "4.6.1", "_assets": [ "extra/citation.cff", "extra/citation.html", "extra/citation.json", "extra/citation.txt", "extra/contents.json", "extra/readme.html", "extra/readme.md", "extra/ZarrDataFrame.html", "LICENSE", "manual.pdf" ], "_cranurl": false, "_exports": [ "DelayedArray", "extract_array", "extractCOLS", "extractROWS", "normalizeSingleBracketReplacementValue", "open_zarr", "path", "replaceCOLS", "replaceROWS", "type", "ZarrColumnSeed", "ZarrColumnVector", "zarrcreateGroup", "ZarrDataFrame" ], "_help": [ { "page": "open_zarr", "title": "open_zarr", "topics": [ "open_zarr" ] }, { "page": "ZarrColumnSeed", "title": "Column of an Zarr-based data frame", "topics": [ "DelayedArray,ZarrColumnSeed-method", "dim,ZarrColumnSeed-method", "extract_array,ZarrColumnSeed-method", "path,ZarrColumnSeed-method", "type,ZarrColumnSeed-method", "ZarrColumnSeed", "ZarrColumnSeed-class", "ZarrColumnVector", "ZarrColumnVector-class" ] }, { "page": "zarrcreateGroup", "title": "zarrcreateGroup", "topics": [ "zarrcreateGroup" ] }, { "page": "ZarrDataFrame", "title": "Zarr-backed DataFrame", "topics": [ "as.data.frame,ZarrDataFrame-method", "cbind,ZarrDataFrame-method", "cbind.ZarrDataFrame", "coerce,ZarrDataFrame,DFrame-method", "extractCOLS,ZarrDataFrame-method", "extractROWS,ZarrDataFrame,ANY-method", "length,ZarrDataFrame-method", "names,ZarrDataFrame-method", "names<-,ZarrDataFrame-method", "ncol,ZarrDataFrame-method", "normalizeSingleBracketReplacementValue,ZarrDataFrame-method", "nrow,ZarrDataFrame-method", "path,ZarrDataFrame-method", "replaceCOLS,ZarrDataFrame-method", "replaceROWS,ZarrDataFrame-method", "rownames,ZarrDataFrame-method", "rownames<-,ZarrDataFrame-method", "ZarrDataFrame", "ZarrDataFrame-class", "[[,ZarrDataFrame-method", "[[<-,ZarrDataFrame-method" ] } ], "_readme": "https://github.com/BIMSBbioinfo/ZarrDataFrame/raw/HEAD/README.md", "_rundeps": [ "abind", "askpass", "base64enc", "BiocGenerics", "cli", "curl", "DelayedArray", "digest", "generics", "glue", "grumpy", "httr2", "IRanges", "jsonlite", "lattice", "lifecycle", "magrittr", "Matrix", "MatrixGenerics", "matrixStats", "openssl", "paws.common", "paws.storage", "R.methodsS3", "R.oo", "R.utils", "R6", "rappdirs", "Rarr", "Rcpp", "rlang", "S4Arrays", "S4Vectors", "SparseArray", "sys", "vctrs", "withr", "xml2", "XVector", "ZarrArray" ], "_score": 2.7781512503836434, "_indexed": true, "_nocasepkg": "zarrdataframe", "_universes": [ "bimsbbioinfo", "artur-man" ], "_binaries": [ { "r": "4.7.0", "os": "linux", "version": "0.0.0", "date": "2026-07-03T20:11:30.000Z", "distro": "resolute", "commit": "f5f671521934b2afc3c511f8c09181bc7bb789a4", "fileid": "https://r2.ropensci.org/a41640f4032ed53927e204e26efbf92c1c9c654a45a9923e4fdd9fb7b70af718", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/bimsbbioinfo/actions/runs/28681213034" }, { "r": "4.6.1", "os": "linux", "version": "0.0.0", "date": "2026-07-03T20:11:38.000Z", "distro": "resolute", "commit": "f5f671521934b2afc3c511f8c09181bc7bb789a4", "fileid": "https://r2.ropensci.org/ee6385ff1ca5e31fcc9001557a99eb2364351f52d1ae57f614292cb450ebe383", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/bimsbbioinfo/actions/runs/28681213034" }, { "r": "4.5.3", "os": "mac", "version": "0.0.0", "date": "2026-07-03T20:10:48.000Z", "commit": "f5f671521934b2afc3c511f8c09181bc7bb789a4", "fileid": "https://r2.ropensci.org/6ad0db155f94c1f9f05f3cb13867694de043a009101d2e6946c24a9af34396ee", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/bimsbbioinfo/actions/runs/28681213034" }, { "r": "4.6.1", "os": "mac", "version": "0.0.0", "date": "2026-07-03T20:10:50.000Z", "commit": "f5f671521934b2afc3c511f8c09181bc7bb789a4", "fileid": "https://r2.ropensci.org/69626fce54dd3477c7d869bd99f84216e5aa33cac5b529a7bb0ab9108dd7a5b7", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/bimsbbioinfo/actions/runs/28681213034" }, { "r": "4.6.0", "os": "wasm", "version": "0.0.0", "date": "2026-07-03T20:12:01.000Z", "commit": "f5f671521934b2afc3c511f8c09181bc7bb789a4", "fileid": "https://r2.ropensci.org/ba431c1c9411772e38011b8c8e85153102aa1d5c9db8672386818e08a878c8f8", "status": "success", "buildurl": "https://github.com/r-universe/bimsbbioinfo/actions/runs/28681213034" }, { "r": "4.7.0", "os": "win", "version": "0.0.0", "date": "2026-07-03T20:10:46.000Z", "commit": "f5f671521934b2afc3c511f8c09181bc7bb789a4", "fileid": "https://r2.ropensci.org/f84e519ea98e5da2ddc5fab3af7146a2a4eb7d169a4dccb67463e695f3dab764", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/bimsbbioinfo/actions/runs/28681213034" }, { "r": "4.5.3", "os": "win", "version": "0.0.0", "date": "2026-07-03T20:10:26.000Z", "commit": "f5f671521934b2afc3c511f8c09181bc7bb789a4", "fileid": "https://r2.ropensci.org/e20d3dbc171a7006f9cd966d363cc1a4cbec0da658b34cd8323521d643f14e8e", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/bimsbbioinfo/actions/runs/28681213034" }, { "r": "4.6.1", "os": "win", "version": "0.0.0", "date": "2026-07-03T20:10:42.000Z", "commit": "f5f671521934b2afc3c511f8c09181bc7bb789a4", "fileid": "https://r2.ropensci.org/b4bf3c8bda56273048ad20d9682372f698bcf3e95e5da282682806a3a399cab3", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/bimsbbioinfo/actions/runs/28681213034" } ] }