{
  "_id": "6ab76a5399f7aa8c6aa30580",
  "Package": "ZarrDataFrame",
  "Version": "0.0.0",
  "Date": "2024-03-11",
  "Title": "Bioconductor-friendly Bindings for Zarr",
  "Description": "Implements bindings for zarr store that are compatible\nwith Bioconductor S4 data structures, namely the DataFrame and\nDelayedArray. This allows Zarr-backed data to be easily used as\ndata frames with arbitrary sets of columns",
  "Authors@R": "c(\nperson(\"Artur\", \"Manukyan\", role=c(\"aut\", \"cre\"), email=\"artur-man@hotmail.com\")\n)",
  "License": "MIT + file LICENSE",
  "biocViews": "DataRepresentation, Infrastructure, Software",
  "VignetteBuilder": "knitr",
  "RoxygenNote": "7.3.3",
  "Encoding": "UTF-8",
  "Config/testthat/edition": "3",
  "Config/pak/sysreqs": "libblosc-dev libxml2-dev libzstd-dev libssl-dev\nzlib1g-dev",
  "Repository": "https://bimsbbioinfo.r-universe.dev",
  "Date/Publication": "2026-04-27 20:41:35 UTC",
  "RemoteUrl": "https://github.com/BIMSBbioinfo/ZarrDataFrame",
  "RemoteRef": "HEAD",
  "RemoteSha": "f5f671521934b2afc3c511f8c09181bc7bb789a4",
  "NeedsCompilation": "no",
  "Packaged": {
    "Date": "2026-09-26 06:41:20 UTC",
    "User": "root"
  },
  "Author": "Artur Manukyan [aut, cre]",
  "Maintainer": "Artur Manukyan <artur-man@hotmail.com>",
  "_user": "bimsbbioinfo",
  "_type": "src",
  "_file": "ZarrDataFrame_0.0.0.tar.gz",
  "_fileid": "https://r2.ropensci.org/8864598a952226466c6e203f5eb49ca8c516250679d2851b6937546f45027834",
  "_filesize": 90429,
  "_sha256": "8864598a952226466c6e203f5eb49ca8c516250679d2851b6937546f45027834",
  "_expires": "2027-01-04T06:46:41.000Z",
  "_created": "2026-09-26T06:41:20.000Z",
  "_published": "2026-09-26T06:46:43.611Z",
  "_jobs": [
    {
      "job": 108355873289,
      "time": 269,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "NOTE",
      "artifact": "10899724605"
    },
    {
      "job": 108355873333,
      "time": 222,
      "config": "linux-release-x86_64",
      "r": "4.6.1",
      "check": "NOTE",
      "artifact": "10900211553"
    },
    {
      "job": 108355873442,
      "time": 124,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "NOTE",
      "artifact": "10900251374"
    },
    {
      "job": 108355873332,
      "time": 153,
      "config": "macos-release-arm64",
      "r": "4.6.1",
      "check": "NOTE",
      "artifact": "10900072121"
    },
    {
      "job": 108355281049,
      "time": 258,
      "config": "source",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "10899829132"
    },
    {
      "job": 108355873327,
      "time": 125,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "10900028617"
    },
    {
      "job": 108355873397,
      "time": 169,
      "config": "windows-devel-x86_64",
      "r": "4.7.0",
      "check": "NOTE",
      "artifact": "10900356298"
    },
    {
      "job": 108355873307,
      "time": 160,
      "config": "windows-oldrel-x86_64",
      "r": "4.5.3",
      "check": "NOTE",
      "artifact": "10899873925"
    },
    {
      "job": 108355873368,
      "time": 138,
      "config": "windows-release-x86_64",
      "r": "4.6.1",
      "check": "NOTE",
      "artifact": "10899609849"
    }
  ],
  "_host": "GitHub-Actions",
  "_buildurl": "https://github.com/r-universe/bimsbbioinfo/actions/runs/36224302194",
  "_status": "success",
  "_upstream": "https://github.com/BIMSBbioinfo/ZarrDataFrame",
  "_commit": {
    "id": "f5f671521934b2afc3c511f8c09181bc7bb789a4",
    "author": "Artür Manukyan <artur-man@hotmail.com>",
    "committer": "GitHub <noreply@github.com>",
    "message": "Add ZarrArray to DESCRIPTION file",
    "time": 1777322495
  },
  "_maintainer": {
    "name": "Artur Manukyan",
    "email": "artur-man@hotmail.com",
    "login": "artur-man",
    "description": "Bioinformatics Scientist at MDC BIMSB\n",
    "uuid": 39335576
  },
  "_distro": "resolute",
  "_registered": true,
  "_dependencies": [
    {
      "package": "DelayedArray",
      "role": "Depends"
    },
    {
      "package": "S4Vectors",
      "role": "Depends"
    },
    {
      "package": "stats",
      "role": "Imports"
    },
    {
      "package": "utils",
      "role": "Imports"
    },
    {
      "package": "methods",
      "role": "Imports"
    },
    {
      "package": "BiocGenerics",
      "role": "Imports"
    },
    {
      "package": "Rarr",
      "role": "Imports"
    },
    {
      "package": "ZarrArray",
      "role": "Imports"
    },
    {
      "package": "testthat",
      "version": ">= 3.0.0",
      "role": "Suggests"
    },
    {
      "package": "knitr",
      "role": "Suggests"
    }
  ],
  "_owner": "bimsbbioinfo",
  "_selfowned": true,
  "_usedby": 2,
  "_updates": [
    {
      "week": "2026-17",
      "n": 1
    },
    {
      "week": "2026-18",
      "n": 1
    }
  ],
  "_tags": [],
  "_topics": [
    "datarepresentation",
    "infrastructure",
    "software"
  ],
  "_stars": 0,
  "_contributors": [
    {
      "user": "artur-man",
      "count": 15,
      "uuid": 39335576
    }
  ],
  "_userbio": {
    "uuid": 6482905,
    "type": "organization",
    "name": "BIMSB bioinformatics platform / Akalin Lab",
    "followers": 194,
    "description": "git repositories for the Akalin lab"
  },
  "_downloads": {
    "count": 0,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/ZarrDataFrame"
  },
  "_devurl": "https://github.com/bimsbbioinfo/zarrdataframe",
  "_searchresults": 1,
  "_rbuild": "4.6.1",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/manual.pdf",
    "extra/readme.html",
    "extra/readme.md",
    "extra/ZarrDataFrame.html",
    "LICENSE"
  ],
  "_cranurl": false,
  "_exports": [
    "DelayedArray",
    "extract_array",
    "extractCOLS",
    "extractROWS",
    "normalizeSingleBracketReplacementValue",
    "open_zarr",
    "path",
    "replaceCOLS",
    "replaceROWS",
    "type",
    "ZarrColumnSeed",
    "ZarrColumnVector",
    "zarrcreateGroup",
    "ZarrDataFrame"
  ],
  "_help": [
    {
      "page": "open_zarr",
      "title": "open_zarr",
      "topics": [
        "open_zarr"
      ]
    },
    {
      "page": "ZarrColumnSeed",
      "title": "Column of an Zarr-based data frame",
      "topics": [
        "DelayedArray,ZarrColumnSeed-method",
        "dim,ZarrColumnSeed-method",
        "extract_array,ZarrColumnSeed-method",
        "path,ZarrColumnSeed-method",
        "type,ZarrColumnSeed-method",
        "ZarrColumnSeed",
        "ZarrColumnSeed-class",
        "ZarrColumnVector",
        "ZarrColumnVector-class"
      ]
    },
    {
      "page": "zarrcreateGroup",
      "title": "zarrcreateGroup",
      "topics": [
        "zarrcreateGroup"
      ]
    },
    {
      "page": "ZarrDataFrame",
      "title": "Zarr-backed DataFrame",
      "topics": [
        "as.data.frame,ZarrDataFrame-method",
        "cbind,ZarrDataFrame-method",
        "cbind.ZarrDataFrame",
        "coerce,ZarrDataFrame,DFrame-method",
        "extractCOLS,ZarrDataFrame-method",
        "extractROWS,ZarrDataFrame,ANY-method",
        "length,ZarrDataFrame-method",
        "names,ZarrDataFrame-method",
        "names<-,ZarrDataFrame-method",
        "ncol,ZarrDataFrame-method",
        "normalizeSingleBracketReplacementValue,ZarrDataFrame-method",
        "nrow,ZarrDataFrame-method",
        "path,ZarrDataFrame-method",
        "replaceCOLS,ZarrDataFrame-method",
        "replaceROWS,ZarrDataFrame-method",
        "rownames,ZarrDataFrame-method",
        "rownames<-,ZarrDataFrame-method",
        "ZarrDataFrame",
        "ZarrDataFrame-class",
        "[[,ZarrDataFrame-method",
        "[[<-,ZarrDataFrame-method"
      ]
    }
  ],
  "_readme": "https://github.com/BIMSBbioinfo/ZarrDataFrame/raw/HEAD/README.md",
  "_rundeps": [
    "abind",
    "askpass",
    "base64enc",
    "BiocGenerics",
    "cli",
    "curl",
    "DelayedArray",
    "digest",
    "generics",
    "glue",
    "grumpy",
    "httr2",
    "IRanges",
    "jsonlite",
    "lattice",
    "lifecycle",
    "magrittr",
    "Matrix",
    "MatrixGenerics",
    "matrixStats",
    "openssl",
    "paws.common",
    "paws.storage",
    "R.methodsS3",
    "R.oo",
    "R.utils",
    "R6",
    "Rarr",
    "Rcpp",
    "rlang",
    "S4Arrays",
    "S4Vectors",
    "SparseArray",
    "sys",
    "vctrs",
    "withr",
    "xml2",
    "XVector",
    "ZarrArray"
  ],
  "_score": 2.7781512503836434,
  "_indexed": true,
  "_nocasepkg": "zarrdataframe",
  "_universes": [
    "bimsbbioinfo",
    "artur-man"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "0.0.0",
      "date": "2026-09-26T06:44:41.000Z",
      "distro": "resolute",
      "commit": "f5f671521934b2afc3c511f8c09181bc7bb789a4",
      "fileid": "https://r2.ropensci.org/5b41ca3599f37e6370771831da60bae57a66038365934889ed56b8c2b71890d8",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/bimsbbioinfo/actions/runs/36224302194"
    },
    {
      "r": "4.6.1",
      "os": "linux",
      "version": "0.0.0",
      "date": "2026-09-26T06:44:20.000Z",
      "distro": "resolute",
      "commit": "f5f671521934b2afc3c511f8c09181bc7bb789a4",
      "fileid": "https://r2.ropensci.org/87b4f1a36f11890ef67f208445584123ee8701d485659d0db08103563f11115b",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/bimsbbioinfo/actions/runs/36224302194"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "0.0.0",
      "date": "2026-09-26T06:43:03.000Z",
      "commit": "f5f671521934b2afc3c511f8c09181bc7bb789a4",
      "fileid": "https://r2.ropensci.org/272b56bd13a12bd7853798e7df23a9140964436dd705071370aa0c1095f655d7",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/bimsbbioinfo/actions/runs/36224302194"
    },
    {
      "r": "4.6.1",
      "os": "mac",
      "version": "0.0.0",
      "date": "2026-09-26T06:43:20.000Z",
      "commit": "f5f671521934b2afc3c511f8c09181bc7bb789a4",
      "fileid": "https://r2.ropensci.org/6a7cea7afba77750711eda67d66e8b4148d1965c0d809d677b6e80273c9eacc6",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/bimsbbioinfo/actions/runs/36224302194"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "0.0.0",
      "date": "2026-09-26T06:43:55.000Z",
      "commit": "f5f671521934b2afc3c511f8c09181bc7bb789a4",
      "fileid": "https://r2.ropensci.org/8b64cf9ee8a1fe2af4311de92f7b3c873a8759d003205349c511d1bd94b49676",
      "status": "success",
      "buildurl": "https://github.com/r-universe/bimsbbioinfo/actions/runs/36224302194"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "0.0.0",
      "date": "2026-09-26T06:43:02.000Z",
      "commit": "f5f671521934b2afc3c511f8c09181bc7bb789a4",
      "fileid": "https://r2.ropensci.org/2413bf2f97deca1e8248aee39118a471d085f02c570377274ca3b256284859a8",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/bimsbbioinfo/actions/runs/36224302194"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "0.0.0",
      "date": "2026-09-26T06:43:03.000Z",
      "commit": "f5f671521934b2afc3c511f8c09181bc7bb789a4",
      "fileid": "https://r2.ropensci.org/44a9fc9d6fb0f4eae2cc91c2a523632352b4c20c9c31d26877c70b605a1304d6",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/bimsbbioinfo/actions/runs/36224302194"
    },
    {
      "r": "4.6.1",
      "os": "win",
      "version": "0.0.0",
      "date": "2026-09-26T06:42:58.000Z",
      "commit": "f5f671521934b2afc3c511f8c09181bc7bb789a4",
      "fileid": "https://r2.ropensci.org/a69db997bfd31bf989d0a71f2b27376cf368f550df0dda9220e59b49303756ee",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/bimsbbioinfo/actions/runs/36224302194"
    }
  ]
}