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      {
        "key": "VoltRon::igraph",
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        "key": "VoltRon::image_matrix",
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      {
        "key": "VoltRon::metadata_data",
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      {
        "key": "VoltRon::vrAssay",
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      {
        "key": "VoltRon::vrAssayV2",
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      {
        "key": "VoltRon::vrBlock",
        "hash": "2445ccab39a2410d"
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      {
        "key": "VoltRon::vrImage",
        "hash": "152a93391d0dfb0b"
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      {
        "key": "VoltRon::vrLayer",
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        "key": "VoltRon::vrMetadata",
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      {
        "key": "VoltRon::vrSample",
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      },
      {
        "key": "VoltRon::vrSpatial",
        "hash": "cbea0c78f6d028b0"
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    ],
    "imports": [
      {
        "key": "Rcpp::Rcpp_precious_preserve()",
        "hash": "33a97ea62b293da6"
      },
      {
        "key": "Rcpp::Rcpp_precious_remove()",
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      {
        "key": "Rcpp::dataptr()",
        "hash": "54e69ad2e6668c83"
      },
      {
        "key": "Rcpp::demangle()",
        "hash": "b0cfd6754c5ebc4e"
      },
      {
        "key": "Rcpp::enterRNGScope()",
        "hash": "a04a299137cef947"
      },
      {
        "key": "Rcpp::exitRNGScope()",
        "hash": "a04a299137cef947"
      },
      {
        "key": "Rcpp::rcpp_get_stack_trace()",
        "hash": "c684a9bbe15cdc52"
      },
      {
        "key": "Rcpp::rcpp_set_stack_trace()",
        "hash": "33a97ea62b293da6"
      },
      {
        "key": "S4Vectors::Annotated",
        "hash": "9b5b8ee6ad9969f8"
      },
      {
        "key": "S4Vectors::DataFrame",
        "hash": "3b243fae76ac8fcf"
      },
      {
        "key": "S4Vectors::DataFrame_OR_NULL",
        "hash": "89b5479ea6c0bd52"
      },
      {
        "key": "S4Vectors::List",
        "hash": "90a253151dc8db9b"
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      {
        "key": "S4Vectors::RectangularData",
        "hash": "d414a10823a4aada"
      },
      {
        "key": "S4Vectors::Vector",
        "hash": "09cab0bd77ae353b"
      },
      {
        "key": "S4Vectors::list_OR_List",
        "hash": "fcd6e1f6a8d39f9c"
      },
      {
        "key": "S4Vectors::vector_OR_Vector",
        "hash": "f3fc18c9f8ff2633"
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    ]
  },
  "_rbuild": "4.6.2",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/manual.pdf",
    "extra/NEWS.html",
    "extra/NEWS.txt",
    "extra/readme.html",
    "extra/readme.md",
    "extra/VoltRon.html",
    "LICENSE"
  ],
  "_cranurl": false,
  "_exports": [
    "addAssay",
    "addBlockConnectivity",
    "addFeature",
    "addMetadata",
    "addSpatialLayer",
    "annotateSpatialData",
    "as.AnnData",
    "as.Giotto",
    "as.OmeTiff",
    "as.OmeZarr",
    "as.Seurat",
    "as.SpatialExperiment",
    "as.VoltRon",
    "as.Zarr",
    "combineChannels",
    "combineGraphs",
    "convertAnnDataToVoltRon",
    "fixVoltRon",
    "flipCoordinates",
    "formAssay",
    "formSpatial",
    "formVoltRon",
    "FromSegmentToCrop",
    "generateCosMxImage",
    "generateGeoJSON",
    "generateSegments",
    "generateTileData",
    "generateXeniumImage",
    "getBasilisk",
    "getClusters",
    "getDeconvolution",
    "getDiffExp",
    "getFeatures",
    "getHotSpotAnalysis",
    "getNicheAssay",
    "getOmeTiffChannels",
    "getPCA",
    "getProfileNeighbors",
    "getRcppAutomatedRegistration",
    "getRcppManualRegistration",
    "getSpatialNeighbors",
    "getUMAP",
    "getVariableFeatures",
    "import10Xh5",
    "importCosMx",
    "importDBITSeq",
    "importGenePS",
    "importGeoMx",
    "importImageData",
    "importOpenST",
    "importPhenoCycler",
    "importQuPathIF",
    "importSTOmics",
    "importVisium",
    "importVisiumHD",
    "importXenium",
    "loadVoltRon",
    "merge",
    "Metadata",
    "Metadata<-",
    "modulateImage",
    "normalizeData",
    "open_zarr",
    "registerSpatialData",
    "resizeImage",
    "SampleMetadata",
    "saveVoltRon",
    "subset",
    "transferData",
    "updateAssay",
    "vrAssayNames",
    "vrAssayParams",
    "vrAssayTypes",
    "vrBarPlot",
    "vrCoordinates",
    "vrCoordinates<-",
    "vrData",
    "vrEmbeddingFeaturePlot",
    "vrEmbeddingNames",
    "vrEmbeddingPlot",
    "vrEmbeddings",
    "vrEmbeddings<-",
    "vrFeatureData",
    "vrFeatureData<-",
    "vrFeatures",
    "vrFeatureTypeNames",
    "vrGraph",
    "vrGraph<-",
    "vrGraphNames",
    "vrHeatmapPlot",
    "vrImageChannelNames",
    "vrImageNames",
    "vrImages",
    "vrImages<-",
    "vrMainAssay",
    "vrMainAssay<-",
    "vrMainChannel",
    "vrMainChannel<-",
    "vrMainFeatureType",
    "vrMainFeatureType<-",
    "vrMainImage",
    "vrMainImage<-",
    "vrMainSpatial",
    "vrMainSpatial<-",
    "vrNeighbourhoodEnrichment",
    "vrNeighbourhoodEnrichmentPlot",
    "vrProportionPlot",
    "vrSampleNames",
    "vrScatterPlot",
    "vrSegments",
    "vrSegments<-",
    "vrSpatialFeaturePlot",
    "vrSpatialNames",
    "vrSpatialPlot",
    "vrSpatialPoints",
    "vrSpatialPoints<-",
    "vrViolinPlot",
    "warpImage",
    "warpSimpleITKImage",
    "zarrcreateGroup"
  ],
  "_datasets": [
    {
      "name": "melc_data",
      "title": "Example MELC Data",
      "object": "melc_data",
      "class": [
        "VoltRon"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "merged_object",
      "title": "Example Transfer Data",
      "object": "merged_object",
      "class": [
        "VoltRon"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "visium_data",
      "title": "Example Visium Data",
      "object": "visium_data",
      "class": [
        "VoltRon"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "xenium_data",
      "title": "Example Xenium Data",
      "object": "xenium_data",
      "class": [
        "VoltRon"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    }
  ],
  "_help": [
    {
      "page": "VoltRon-package",
      "title": "VoltRon: VoltRon for Spatial Omics Data Integration and Analysis",
      "topics": [
        "VoltRon-package"
      ]
    },
    {
      "page": "addAssay",
      "title": "Add Assay",
      "topics": [
        "addAssay",
        "addAssay,VoltRon-method",
        "addAssay,vrMetadata-method"
      ]
    },
    {
      "page": "addBlockConnectivity",
      "title": "addBlockConnectivity",
      "topics": [
        "addBlockConnectivity"
      ]
    },
    {
      "page": "addFeature",
      "title": "addFeature",
      "topics": [
        "addFeature",
        "addFeature,VoltRon-method",
        "addFeature,vrAssayV2-method"
      ]
    },
    {
      "page": "addMetadata",
      "title": "addMetadata",
      "topics": [
        "addMetadata"
      ]
    },
    {
      "page": "addSpatialLayer",
      "title": "addSpatialLayer",
      "topics": [
        "addSpatialLayer"
      ]
    },
    {
      "page": "annotateSpatialData",
      "title": "annotateSpatialData",
      "topics": [
        "annotateSpatialData"
      ]
    },
    {
      "page": "as.AnnData",
      "title": "as.AnnData",
      "topics": [
        "as.AnnData"
      ]
    },
    {
      "page": "as.Giotto",
      "title": "as.Giotto",
      "topics": [
        "as.Giotto"
      ]
    },
    {
      "page": "as.OmeTiff",
      "title": "as.OmeTiff",
      "topics": [
        "as.OmeTiff"
      ]
    },
    {
      "page": "as.OmeZarr",
      "title": "as.OmeZarr",
      "topics": [
        "as.OmeZarr"
      ]
    },
    {
      "page": "as.Seurat",
      "title": "as.Seurat",
      "topics": [
        "as.Seurat"
      ]
    },
    {
      "page": "as.SpatialExperiment",
      "title": "as.SpatialExperiment",
      "topics": [
        "as.SpatialExperiment"
      ]
    },
    {
      "page": "as.VoltRon",
      "title": "as.VoltRon",
      "topics": [
        "as.VoltRon",
        "as.VoltRon.Seurat",
        "as.VoltRon.SpatialExperiment"
      ]
    },
    {
      "page": "as.Zarr",
      "title": "as.Zarr",
      "topics": [
        "as.Zarr",
        "as.Zarr.magick-image"
      ]
    },
    {
      "page": "combineChannels",
      "title": "combineChannels",
      "topics": [
        "combineChannels",
        "combineChannels,VoltRon-method",
        "combineChannels,vrAssay-method",
        "combineChannels,vrAssayV2-method",
        "combineChannels,vrImage-method",
        "combineChannels,vrSpatial-method"
      ]
    },
    {
      "page": "combineGraphs",
      "title": "combineGraphs",
      "topics": [
        "combineGraphs"
      ]
    },
    {
      "page": "convertAnnDataToVoltRon",
      "title": "convertAnnDataToVoltRon",
      "topics": [
        "convertAnnDataToVoltRon"
      ]
    },
    {
      "page": "demuxVoltRon",
      "title": "demuxVoltRon",
      "topics": [
        "demuxVoltRon"
      ]
    },
    {
      "page": "dummy_cols",
      "title": "Fast creation of dummy variables",
      "topics": [
        "dummy_cols"
      ]
    },
    {
      "page": "fixVoltRon",
      "title": "fixVoltRon",
      "topics": [
        "fixVoltRon"
      ]
    },
    {
      "page": "flipCoordinates",
      "title": "flipCoordinates",
      "topics": [
        "flipCoordinates",
        "flipCoordinates,VoltRon-method",
        "flipCoordinates,vrAssay-method",
        "flipCoordinates,vrAssayV2-method"
      ]
    },
    {
      "page": "formAssay",
      "title": "formAssay",
      "topics": [
        "formAssay"
      ]
    },
    {
      "page": "formSpatial",
      "title": "formSpatial",
      "topics": [
        "formSpatial"
      ]
    },
    {
      "page": "formVoltRon",
      "title": "formVoltRon",
      "topics": [
        "formVoltRon"
      ]
    },
    {
      "page": "FromSegmentToCrop",
      "title": "FromSegmentToCrop",
      "topics": [
        "FromSegmentToCrop"
      ]
    },
    {
      "page": "generateCosMxImage",
      "title": "generateCosMxImage",
      "topics": [
        "generateCosMxImage"
      ]
    },
    {
      "page": "generateGeoJSON",
      "title": "generateGeoJSON",
      "topics": [
        "generateGeoJSON"
      ]
    },
    {
      "page": "generateSegments",
      "title": "generateSegments",
      "topics": [
        "generateSegments"
      ]
    },
    {
      "page": "generateTileData",
      "title": "generateTileData",
      "topics": [
        "generateTileData",
        "generateTileData,VoltRon-method",
        "generateTileData,vrAssay-method",
        "generateTileData,vrAssayV2-method"
      ]
    },
    {
      "page": "generateXeniumImage",
      "title": "generateXeniumImage",
      "topics": [
        "generateXeniumImage"
      ]
    },
    {
      "page": "getBasilisk",
      "title": "get the Python Basilisk environment",
      "topics": [
        "getBasilisk"
      ]
    },
    {
      "page": "getClusters",
      "title": "getClusters",
      "topics": [
        "getClusters"
      ]
    },
    {
      "page": "getDeconvolution",
      "title": "getDeconvolution",
      "topics": [
        "getDeconvolution"
      ]
    },
    {
      "page": "getDiffExp",
      "title": "getDiffExp",
      "topics": [
        "getDiffExp"
      ]
    },
    {
      "page": "getFeatures",
      "title": "getFeatures",
      "topics": [
        "getFeatures",
        "getFeatures,VoltRon-method",
        "getFeatures,vrAssay-method",
        "getFeatures,vrAssayV2-method"
      ]
    },
    {
      "page": "getHotSpotAnalysis",
      "title": "getHotSpotAnalysis",
      "topics": [
        "getHotSpotAnalysis"
      ]
    },
    {
      "page": "getNicheAssay",
      "title": "getNicheAssay",
      "topics": [
        "getNicheAssay"
      ]
    },
    {
      "page": "getOmeTiffChannels",
      "title": "getOmeTiffChannels",
      "topics": [
        "getOmeTiffChannels"
      ]
    },
    {
      "page": "getPCA",
      "title": "getPCA",
      "topics": [
        "getPCA",
        "getPCA,data_matrix-method",
        "getPCA,VoltRon-method"
      ]
    },
    {
      "page": "getProfileNeighbors",
      "title": "Get profile specific neighbors",
      "topics": [
        "getProfileNeighbors"
      ]
    },
    {
      "page": "getRcppAutomatedRegistration",
      "title": "getRcppAutomatedRegistration",
      "topics": [
        "getRcppAutomatedRegistration"
      ]
    },
    {
      "page": "getRcppManualRegistration",
      "title": "getRcppManualRegistration",
      "topics": [
        "getRcppManualRegistration"
      ]
    },
    {
      "page": "getSpatialNeighbors",
      "title": "Get spatial neighbors",
      "topics": [
        "getSpatialNeighbors"
      ]
    },
    {
      "page": "getUMAP",
      "title": "getUMAP",
      "topics": [
        "getUMAP"
      ]
    },
    {
      "page": "getVariableFeatures",
      "title": "getVariableFeatures",
      "topics": [
        "getVariableFeatures"
      ]
    },
    {
      "page": "import10Xh5",
      "title": "import10Xh5",
      "topics": [
        "import10Xh5"
      ]
    },
    {
      "page": "importCosMx",
      "title": "importCosMx",
      "topics": [
        "importCosMx"
      ]
    },
    {
      "page": "importDBITSeq",
      "title": "importDBITSeq",
      "topics": [
        "importDBITSeq"
      ]
    },
    {
      "page": "importGenePS",
      "title": "importGenePS",
      "topics": [
        "importGenePS"
      ]
    },
    {
      "page": "importGeoMx",
      "title": "importGeoMx",
      "topics": [
        "importGeoMx"
      ]
    },
    {
      "page": "importImageData",
      "title": "importImageData",
      "topics": [
        "importImageData"
      ]
    },
    {
      "page": "importOpenST",
      "title": "importOpenST",
      "topics": [
        "importOpenST"
      ]
    },
    {
      "page": "importPhenoCycler",
      "title": "importPhenoCycler",
      "topics": [
        "importPhenoCycler"
      ]
    },
    {
      "page": "importQuPathIF",
      "title": "importImageData",
      "topics": [
        "importQuPathIF"
      ]
    },
    {
      "page": "importSTOmics",
      "title": "importSTOmics",
      "topics": [
        "importSTOmics"
      ]
    },
    {
      "page": "importVisium",
      "title": "importVisium",
      "topics": [
        "importVisium"
      ]
    },
    {
      "page": "importVisiumHD",
      "title": "importVisiumHD",
      "topics": [
        "importVisiumHD"
      ]
    },
    {
      "page": "importXenium",
      "title": "importXenium",
      "topics": [
        "importXenium"
      ]
    },
    {
      "page": "knn",
      "title": "knn_annoy",
      "topics": [
        "knn_annoy"
      ]
    },
    {
      "page": "loadVoltRon",
      "title": "loadVoltRon",
      "topics": [
        "loadVoltRon"
      ]
    },
    {
      "page": "melc_data",
      "title": "Example MELC Data",
      "topics": [
        "melc_data"
      ]
    },
    {
      "page": "merge",
      "title": "Merging VoltRon objects",
      "topics": [
        "merge",
        "merge,VoltRon,ANY-method"
      ]
    },
    {
      "page": "merge-vrBlock-ANY-method",
      "title": "Merging vrBlock objects",
      "topics": [
        "merge,vrBlock,ANY-method"
      ]
    },
    {
      "page": "merge-vrMetadata-ANY-method",
      "title": "Merging vrMetadata objects",
      "topics": [
        "merge,vrMetadata,ANY-method"
      ]
    },
    {
      "page": "merge-vrSample-ANY-method",
      "title": "Merging vrSample objects",
      "topics": [
        "merge,vrSample,ANY-method"
      ]
    },
    {
      "page": "merged_object",
      "title": "Example Transfer Data",
      "topics": [
        "merged_object"
      ]
    },
    {
      "page": "Metadata",
      "title": "Metadata",
      "topics": [
        "Metadata",
        "Metadata,VoltRon-method",
        "Metadata<-",
        "Metadata<-,VoltRon-method"
      ]
    },
    {
      "page": "modulateImage",
      "title": "modulateImage",
      "topics": [
        "modulateImage",
        "modulateImage,VoltRon-method",
        "modulateImage,vrAssay-method",
        "modulateImage,vrAssayV2-method",
        "modulateImage,vrImage-method",
        "modulateImage,vrSpatial-method"
      ]
    },
    {
      "page": "normalizeData",
      "title": "Normalize Data",
      "topics": [
        "normalizeData",
        "normalizeData,data_matrix-method",
        "normalizeData,VoltRon-method",
        "normalizeData,vrAssay-method",
        "normalizeData,vrAssayV2-method"
      ]
    },
    {
      "page": "open_zarr",
      "title": "open_zarr",
      "topics": [
        "open_zarr"
      ]
    },
    {
      "page": "registerSpatialData",
      "title": "registerSpatialData",
      "topics": [
        "registerSpatialData"
      ]
    },
    {
      "page": "resizeImage",
      "title": "resizeImage",
      "topics": [
        "resizeImage",
        "resizeImage,VoltRon-method",
        "resizeImage,vrAssay-method",
        "resizeImage,vrAssayV2-method",
        "resizeImage,vrImage-method",
        "resizeImage,vrSpatial-method"
      ]
    },
    {
      "page": "SampleMetadata",
      "title": "SampleMetadata",
      "topics": [
        "SampleMetadata"
      ]
    },
    {
      "page": "saveVoltRon",
      "title": "saveVoltRon",
      "topics": [
        "saveVoltRon"
      ]
    },
    {
      "page": "slotApply",
      "title": "slotApply",
      "topics": [
        "slotApply"
      ]
    },
    {
      "page": "slotToList",
      "title": "slotToList",
      "topics": [
        "slotToList"
      ]
    },
    {
      "page": "subset",
      "title": "Subsetting VoltRon objects",
      "topics": [
        "subset",
        "subset,VoltRon-method"
      ]
    },
    {
      "page": "subset-vrAssay-method",
      "title": "Subsetting vrAssay objects",
      "topics": [
        "subset,vrAssay-method"
      ]
    },
    {
      "page": "subset-vrAssayV2-method",
      "title": "Subsetting vrAssayV2 objects",
      "topics": [
        "subset,vrAssayV2-method"
      ]
    },
    {
      "page": "subset-vrBlock-method",
      "title": "Subsetting vrBlock objects",
      "topics": [
        "subset,vrBlock-method"
      ]
    },
    {
      "page": "subset-vrImage-method",
      "title": "Subsetting vrImage objects",
      "topics": [
        "subset,vrImage-method"
      ]
    },
    {
      "page": "subset-vrLayer-method",
      "title": "Subsetting vrLayer objects",
      "topics": [
        "subset,vrLayer-method"
      ]
    },
    {
      "page": "subset-vrMetadata-method",
      "title": "Subsetting vrMetadata objects",
      "topics": [
        "subset,vrMetadata-method"
      ]
    },
    {
      "page": "subset-vrSample-method",
      "title": "Subsetting vrSample objects",
      "topics": [
        "subset,vrSample-method"
      ]
    },
    {
      "page": "subset-vrSpatial-method",
      "title": "Subsetting vrSpatial objects",
      "topics": [
        "subset,vrSpatial-method"
      ]
    },
    {
      "page": "subsetCoordinates",
      "title": "subsetCoordinates",
      "topics": [
        "subsetCoordinates"
      ]
    },
    {
      "page": "subsetSegments",
      "title": "subsetSegments",
      "topics": [
        "subsetSegments"
      ]
    },
    {
      "page": "transferData",
      "title": "transferData",
      "topics": [
        "transferData",
        "transferData,VoltRon,character-method",
        "transferData,VoltRon,Seurat-method",
        "transferData,VoltRon,SingleCellExperiment-method"
      ]
    },
    {
      "page": "updateAssay",
      "title": "Update Assay",
      "topics": [
        "updateAssay",
        "updateAssay,VoltRon-method",
        "updateAssay,vrAssay-method",
        "updateAssay,vrAssayV2-method"
      ]
    },
    {
      "page": "visium_data",
      "title": "Example Visium Data",
      "topics": [
        "visium_data"
      ]
    },
    {
      "page": "VoltRon-class",
      "title": "The VoltRon Class",
      "topics": [
        "VoltRon",
        "VoltRon-class"
      ]
    },
    {
      "page": "VoltRon-methods",
      "title": "Methods for VoltRon",
      "concept": [
        "voltron"
      ],
      "topics": [
        "$.VoltRon",
        "$<-.VoltRon",
        ".DollarNames.VoltRon",
        "VoltRon-methods",
        "[[,VoltRon,character,character-method",
        "[[,VoltRon,character,missing-method",
        "[[,VoltRon-methods",
        "[[<-,VoltRon,character,character,ANY-method",
        "[[<-,VoltRon,character,missing,ANY-method",
        "[[<-,VoltRon-methods"
      ]
    },
    {
      "page": "vrAssay-class",
      "title": "The vrAssay (VoltRon Assay) Class",
      "topics": [
        "vrAssay",
        "vrAssay-class"
      ]
    },
    {
      "page": "vrAssayNames",
      "title": "Get Assay names",
      "topics": [
        "vrAssayNames",
        "vrAssayNames,VoltRon-method",
        "vrAssayNames,vrAssay-method",
        "vrAssayNames,vrAssayV2-method",
        "vrAssayNames,vrMetadata-method",
        "vrAssayNames<-,vrAssay-method",
        "vrAssayNames<-,vrAssayV2-method"
      ]
    },
    {
      "page": "vrAssayParams",
      "title": "Get assay parameters",
      "topics": [
        "vrAssayParams"
      ]
    },
    {
      "page": "vrAssayTypes",
      "title": "Get assay types",
      "topics": [
        "vrAssayTypes",
        "vrAssayTypes,VoltRon-method",
        "vrAssayTypes,vrAssay-method",
        "vrAssayTypes,vrAssayV2-method"
      ]
    },
    {
      "page": "vrAssayV2-class",
      "title": "The vrAssayV2 (VoltRon Assay) Class",
      "topics": [
        "vrAssayV2",
        "vrAssayV2-class"
      ]
    },
    {
      "page": "vrBarPlot",
      "title": "vrBarPlot",
      "topics": [
        "vrBarPlot"
      ]
    },
    {
      "page": "vrBlock-class",
      "title": "The vrBlock (VoltRon Block) Class",
      "topics": [
        "vrBlock",
        "vrBlock-class"
      ]
    },
    {
      "page": "vrCoordinates",
      "title": "vrCoordinates",
      "topics": [
        "vrCoordinates",
        "vrCoordinates,VoltRon-method",
        "vrCoordinates,vrAssay-method",
        "vrCoordinates,vrAssayV2-method",
        "vrCoordinates,vrImage-method",
        "vrCoordinates,vrSpatial-method",
        "vrCoordinates<-",
        "vrCoordinates<-,VoltRon-method",
        "vrCoordinates<-,vrAssay-method",
        "vrCoordinates<-,vrAssayV2-method",
        "vrCoordinates<-,vrImage-method",
        "vrCoordinates<-,vrSpatial-method"
      ]
    },
    {
      "page": "vrData",
      "title": "vrData",
      "topics": [
        "vrData",
        "vrData,VoltRon-method",
        "vrData,vrAssay-method",
        "vrData,vrAssayV2-method"
      ]
    },
    {
      "page": "vrEmbeddingFeaturePlot",
      "title": "vrEmbeddingFeaturePlot",
      "topics": [
        "vrEmbeddingFeaturePlot"
      ]
    },
    {
      "page": "vrEmbeddingNames",
      "title": "Get Embedding names",
      "topics": [
        "vrEmbeddingNames",
        "vrEmbeddingNames,VoltRon-method",
        "vrEmbeddingNames,vrAssay-method",
        "vrEmbeddingNames,vrAssayV2-method"
      ]
    },
    {
      "page": "vrEmbeddingPlot",
      "title": "vrEmbeddingPlot",
      "topics": [
        "vrEmbeddingPlot"
      ]
    },
    {
      "page": "vrEmbeddings",
      "title": "vrEmbeddings",
      "topics": [
        "vrEmbeddings",
        "vrEmbeddings,VoltRon-method",
        "vrEmbeddings,vrAssay-method",
        "vrEmbeddings,vrAssayV2-method",
        "vrEmbeddings<-",
        "vrEmbeddings<-,VoltRon-method",
        "vrEmbeddings<-,vrAssay-method",
        "vrEmbeddings<-,vrAssayV2-method"
      ]
    },
    {
      "page": "vrFeatureData",
      "title": "Feature Data",
      "topics": [
        "vrFeatureData",
        "vrFeatureData,VoltRon-method",
        "vrFeatureData,vrAssay-method",
        "vrFeatureData,vrAssayV2-method",
        "vrFeatureData<-",
        "vrFeatureData<-,VoltRon-method",
        "vrFeatureData<-,vrAssay-method",
        "vrFeatureData<-,vrAssayV2-method"
      ]
    },
    {
      "page": "vrFeatures",
      "title": "vrFeatures",
      "topics": [
        "vrFeatures",
        "vrFeatures,VoltRon-method",
        "vrFeatures,vrAssay-method",
        "vrFeatures,vrAssayV2-method"
      ]
    },
    {
      "page": "vrFeatureTypeNames",
      "title": "vrFeatureTypeNames",
      "topics": [
        "vrFeatureTypeNames",
        "vrFeatureTypeNames,VoltRon-method",
        "vrFeatureTypeNames,vrAssay-method",
        "vrFeatureTypeNames,vrAssayV2-method"
      ]
    },
    {
      "page": "vrGraph",
      "title": "vrGraph",
      "topics": [
        "vrGraph",
        "vrGraph<-"
      ]
    },
    {
      "page": "vrGraphNames",
      "title": "vrGraphNames",
      "topics": [
        "vrGraphNames"
      ]
    },
    {
      "page": "vrHeatmapPlot",
      "title": "HeatmapPlot",
      "topics": [
        "vrHeatmapPlot"
      ]
    },
    {
      "page": "vrImage-class",
      "title": "The vrImage (VoltRon Image) Class",
      "topics": [
        "vrImage",
        "vrImage-class"
      ]
    },
    {
      "page": "vrImageChannelNames",
      "title": "vrImageChannelNames",
      "topics": [
        "vrImageChannelNames",
        "vrImageChannelNames,VoltRon-method",
        "vrImageChannelNames,vrAssay-method",
        "vrImageChannelNames,vrAssayV2-method",
        "vrImageChannelNames,vrImage-method",
        "vrImageChannelNames,vrSpatial-method"
      ]
    },
    {
      "page": "vrImageNames",
      "title": "vrImageNames",
      "topics": [
        "vrImageNames",
        "vrImageNames,VoltRon-method",
        "vrImageNames,vrAssay-method",
        "vrImageNames,vrAssayV2-method"
      ]
    },
    {
      "page": "vrImages",
      "title": "vrImages",
      "topics": [
        "vrImages",
        "vrImages,VoltRon-method",
        "vrImages,vrAssay-method",
        "vrImages,vrAssayV2-method",
        "vrImages,vrImage-method",
        "vrImages,vrSpatial-method",
        "vrImages<-",
        "vrImages<-,vrAssay-method",
        "vrImages<-,vrAssayV2-method",
        "vrImages<-,vrImage-method",
        "vrImages<-,vrSpatial-method"
      ]
    },
    {
      "page": "vrLayer-class",
      "title": "The vrLayer (VoltRon Layer) Class",
      "topics": [
        "vrLayer",
        "vrLayer-class"
      ]
    },
    {
      "page": "vrLayer-methods",
      "title": "Methods for vrLayer objects",
      "concept": [
        "vrlayer"
      ],
      "topics": [
        "vrLayer-methods",
        "[[,vrLayer,character,ANY-method",
        "[[<-,vrLayer,character,ANY,ANY-method"
      ]
    },
    {
      "page": "vrMainAssay",
      "title": "Main Assay",
      "topics": [
        "vrMainAssay",
        "vrMainAssay,VoltRon-method",
        "vrMainAssay<-",
        "vrMainAssay<-,VoltRon-method"
      ]
    },
    {
      "page": "vrMainChannel",
      "title": "vrMainChannel",
      "topics": [
        "vrMainChannel",
        "vrMainChannel,vrAssay-method",
        "vrMainChannel,vrAssayV2-method",
        "vrMainChannel,vrImage-method",
        "vrMainChannel,vrSpatial-method",
        "vrMainChannel<-",
        "vrMainChannel<-,vrAssay-method",
        "vrMainChannel<-,vrAssayV2-method",
        "vrMainChannel<-,vrImage-method",
        "vrMainChannel<-,vrSpatial-method"
      ]
    },
    {
      "page": "vrMainFeatureType",
      "title": "vrMainFeatureType",
      "topics": [
        "vrMainFeatureType",
        "vrMainFeatureType,VoltRon-method",
        "vrMainFeatureType,vrAssay-method",
        "vrMainFeatureType,vrAssayV2-method",
        "vrMainFeatureType<-",
        "vrMainFeatureType<-,VoltRon-method",
        "vrMainFeatureType<-,vrAssay-method",
        "vrMainFeatureType<-,vrAssayV2-method"
      ]
    },
    {
      "page": "vrMainImage",
      "title": "vrMainImage",
      "topics": [
        "vrMainImage",
        "vrMainImage,VoltRon-method",
        "vrMainImage,vrAssay-method",
        "vrMainImage,vrAssayV2-method",
        "vrMainImage<-",
        "vrMainImage<-,VoltRon-method",
        "vrMainImage<-,vrAssay-method",
        "vrMainImage<-,vrAssayV2-method"
      ]
    },
    {
      "page": "vrMainSpatial",
      "title": "vrMainSpatial",
      "topics": [
        "vrMainSpatial",
        "vrMainSpatial,VoltRon-method",
        "vrMainSpatial,vrAssay-method",
        "vrMainSpatial,vrAssayV2-method",
        "vrMainSpatial<-",
        "vrMainSpatial<-,VoltRon-method",
        "vrMainSpatial<-,vrAssay-method",
        "vrMainSpatial<-,vrAssayV2-method"
      ]
    },
    {
      "page": "vrMetadata-class",
      "title": "The vrMetadata (VoltRon Metadata) Class",
      "topics": [
        "vrMetadata",
        "vrMetadata-class"
      ]
    },
    {
      "page": "vrNeighbourhoodEnrichment",
      "title": "vrNeighbourhoodEnrichment",
      "topics": [
        "vrNeighbourhoodEnrichment"
      ]
    },
    {
      "page": "vrNeighbourhoodEnrichmentPlot",
      "title": "vrNeighbourhoodEnrichmentPlot",
      "topics": [
        "vrNeighbourhoodEnrichmentPlot"
      ]
    },
    {
      "page": "vrProportionPlot",
      "title": "vrPercentagePlot",
      "topics": [
        "vrProportionPlot"
      ]
    },
    {
      "page": "vrSample-class",
      "title": "The vrSample (VoltRon Sample) Class",
      "topics": [
        "vrSample",
        "vrSample-class"
      ]
    },
    {
      "page": "vrSample-methods",
      "title": "Methods for vrSample objects",
      "concept": [
        "vrsample"
      ],
      "topics": [
        "vrSample-methods",
        "[[,vrBlock,character,ANY-method",
        "[[,vrSample,character,ANY-method",
        "[[<-,vrBlock,character,ANY,ANY-method",
        "[[<-,vrSample,character,ANY,ANY-method"
      ]
    },
    {
      "page": "vrSampleNames",
      "title": "Get Sample names",
      "topics": [
        "vrSampleNames",
        "vrSampleNames,vrMetadata-method"
      ]
    },
    {
      "page": "vrScatterPlot",
      "title": "vrScatterPlot",
      "topics": [
        "vrScatterPlot"
      ]
    },
    {
      "page": "vrSegments",
      "title": "vrSegments",
      "topics": [
        "vrSegments",
        "vrSegments,VoltRon-method",
        "vrSegments,vrAssay-method",
        "vrSegments,vrAssayV2-method",
        "vrSegments,vrImage-method",
        "vrSegments,vrSpatial-method",
        "vrSegments<-",
        "vrSegments<-,VoltRon-method",
        "vrSegments<-,vrAssay-method",
        "vrSegments<-,vrAssayV2-method",
        "vrSegments<-,vrImage-method",
        "vrSegments<-,vrSpatial-method"
      ]
    },
    {
      "page": "vrSpatial-class",
      "title": "The vrSpatial (VoltRon Spatial) Class",
      "topics": [
        "vrSpatial",
        "vrSpatial-class"
      ]
    },
    {
      "page": "vrSpatialFeaturePlot",
      "title": "vrSpatialFeaturePlot",
      "topics": [
        "vrSpatialFeaturePlot"
      ]
    },
    {
      "page": "vrSpatialNames",
      "title": "vrSpatialNames",
      "topics": [
        "vrSpatialNames",
        "vrSpatialNames,VoltRon-method",
        "vrSpatialNames,vrAssay-method",
        "vrSpatialNames,vrAssayV2-method"
      ]
    },
    {
      "page": "vrSpatialPlot",
      "title": "vrSpatialPlot",
      "topics": [
        "vrSpatialPlot"
      ]
    },
    {
      "page": "vrSpatialPoints",
      "title": "vrSpatialPoints",
      "topics": [
        "vrSpatialPoints",
        "vrSpatialPoints,VoltRon-method",
        "vrSpatialPoints,vrAssay-method",
        "vrSpatialPoints,vrAssayV2-method",
        "vrSpatialPoints,vrBlock-method",
        "vrSpatialPoints,vrImage-method",
        "vrSpatialPoints,vrLayer-method",
        "vrSpatialPoints,vrMetadata-method",
        "vrSpatialPoints,vrSample-method",
        "vrSpatialPoints,vrSpatial-method",
        "vrSpatialPoints<-",
        "vrSpatialPoints<-,vrAssay-method",
        "vrSpatialPoints<-,vrAssayV2-method",
        "vrSpatialPoints<-,vrImage-method",
        "vrSpatialPoints<-,vrSpatial-method"
      ]
    },
    {
      "page": "vrViolinPlot",
      "title": "vrViolinPlot",
      "topics": [
        "vrViolinPlot"
      ]
    },
    {
      "page": "warpImage",
      "title": "warpImage",
      "topics": [
        "warpImage"
      ]
    },
    {
      "page": "warpSimpleITKImage",
      "title": "getRcppWarpImage",
      "topics": [
        "warpSimpleITKImage"
      ]
    },
    {
      "page": "xenium_data",
      "title": "Example Xenium Data",
      "topics": [
        "xenium_data"
      ]
    },
    {
      "page": "zarrcreateGroup",
      "title": "zarrcreateGroup",
      "topics": [
        "zarrcreateGroup"
      ]
    }
  ],
  "_readme": "https://github.com/BIMSBbioinfo/VoltRon/raw/HEAD/README.md",
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    "zoo"
  ],
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  ],
  "_score": 6.939927148064356,
  "_indexed": true,
  "_nocasepkg": "voltron",
  "_universes": [
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